9. Example analysis notebooks

We provide example Jupyter notebooks for how to the INCAWrapper. These notebooks represent different functionalities of INCAWrapper and can be used as templates for your own analysis. If you have your data ready, you just have to adjust the paths and let the pre-written code do the work for you. Please don’t forget to give us a shout out! (I.e., please cite us)

If you have any questions, please contact the students currently working on INCAWrapper: You can find their mail addresses on the biosustain website

• Matthias Mattanovich

• Viktor Hesselberg-Thomsen

• 9.1. Isotopically steady state 13C MFA
• 9.2. Isotopically Non-Stationary 13C-MFA
• 9.3. INCAWrapper validation case small toy model
• 9.4. INCAWrapper validation case medium size model